基因识别中的阈值确定算法我要分享

Threshold determination algorithm in gene recognition

基因识别 外显子 exon genes 滑动窗口

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文件大小: 892KB

代码分类: 智能算法

开发平台: matlab

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代码描述

中文说明:

验证了基因外显子的三周期特性,提出了一种优化确定阈值的方法,分别用固定窗口滑动,及滑动序列来对基因进行识别。


English Description:

The three period characteristic of gene exon is verified, and a method to optimize the threshold is proposed. The fixed window sliding and sliding sequence are used to identify genes respectively.


代码预览

genes

.....\AB304259.1.fasta

.....\AB304259.1(酿酒酵母ATP1a,ATP1b,为F1F0- ATP酶复杂,完整的CD ATP1c基因)

.....\.........................................................................\AB304259.1.fasta

.....\.........................................................................\AB304259.1.txt

.....\.........................................................................\AB304259.1_n.txt

.....\AF100306.1(线虫粘粒T24C4,完整序列)

.....\...................................\AF100306.1.fasta

.....\...................................\AF100306.1.txt

.....\...................................\AF100306.1g.txt

.....\bbbbb.txt

.....\comppvsc.asv

.....\comppvsc.m

.....\comppvscr.m

.....\compSNRvvsc.asv

.....\compSNRvvsc.m

.....\compSNRvvscr.m

.....\couprobality.asv

.....\couprobality.m

.....\CP002688.1(拟南芥染色体5,序列1-21000)

.....\......................................\CP002688.1.fasta

.....\......................................\CP002688.1.txt

.....\figure

.....\......\GENES6

.....\......\实数变换对人体线粒体基因的识别(固定窗口).jpg

.....\......\实数变换对人体线粒体基因的识别(移动序列).jpg

.....\......\实数映射下外显子的功率谱.jpg

.....\......\老鼠基因外显子长度与SNR的关系.jpg

.....\......\说明.docx

.....\fixwinp.asv

.....\fixwinp.m

.....\fixwinpREAL.asv

.....\fixwinpREAL.m

.....\fixwinpSNR.asv

.....\fixwinpSNR.m

.....\Genes100.mat

.....\genes200.mat

.....\genes6.mat

.....\movewinsnr.asv

.....\movewinsnr.m

.....\movewinsnragct.asv

.....\movewinsnragct.m

.....\movewinsnrsglp.asv

.....\movewinsnrsglp.m

.....\movewinsnrsglpreal.m

.....\NC_012920_1(人线粒体全基因组)

.....\.............................\NC_012920_1.fasta

.....\.............................\NC_012920_1.txt

.....\.............................\NC_012920_1_cds.txt

.....\NC_012920_1.asv

.....\NC_012920_1.fasta

.....\NC_012920_1.txt

.....\NC_012920_1A.fasta

.....\NC_012920_1C.fasta

.....\NC_012920_1G.fasta

.....\NC_012920_1n.fasta

.....\NC_012920_1T.fasta

.....\NC_012920_1_cds.txt

.....\optimizeR.asv

.....\optimizeR.m

.....\real.m

.....\sgn.m

.....\SNR.asv

.....\SNR.m

.....\sortsnr.asv

.....\sortsnr.m

.....\statisticintrosnr.asv

.....\statisticintrosnr.m

.....\statisticshort.m

.....\statisticsnr.asv

.....\statisticsnr.m

.....\voss.asv

.....\voss.m

.....\zcurve.m